Image Analysis

Cellpose

Counting nuclei with MetaXpress

Export Leica Falcon LAS X FLIM Image Data

Ilastik Pixel Classification and Segmentation

Ilastik Pixel Classification: Batch Processing of Multiple Files

Image Deconvolution using SVI Huygens

Imaris Part 1: File Import using Arena

Imaris Part 1: File conversion and opening files

Imaris Part 2: 3D Visualization

Imaris Part 3: Segmentation and Surfaces

Imaris Part 4: Object Classification

Leica LAS X Navigator - Merge regular and irregular shapes

Leica LASX Auto-Save and How to Handle the Resulting Files

MesoSPIM Stitching using BigStitcher

Metadata

Slidescanner - Zeiss Z1 - PartOptionalA: Export .czi Files to .tif

Slidescanner - Zeiss Z1 - PartOptionalB: Visualize Slide Data Using QuPath

Thermo Fisher MAPS viewer for electron microscopy data