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v1.0

by Karin Seubert

Introduction

If you have a large sample and you want to have a fast overview, the built-in Leica DFC7000 T Color CCD Camera is the ideal partner for this job. It can be operated in both fluorescence and brightfield mode and will capture a widefield image.
Please be aware that thanks to the widefield characteristics, up to your whole sample will be roughly in focus without any further focus definition. However, if you have a very thick sample, it might also lead to seamingly blury samples due to the out-of-focus light.

  1. Switching off the RLD detectors for MP imaging is crucial in order not to harm them!! If needed, save your sequential settings. Deactivate the sequential settings (must be gray).
    • Switching off the RLD detectors for MP imaging is crucial in order not to harm them!!

    • If needed, save your sequential settings.

    • Deactivate the sequential settings (must be gray).

    • Deactivate all HyD-RLD detectors.

    • Activate the camera (widefield mode).

    • Go to the "Navigator".

  2. If you have the camera (widefield) option activated, you will see some widefield-specific tabs on the left. In the "Beam Pass" tab, select "TL-BF" if you want to image with brightfield. Before using brightfield, please remember to remove the protection cap.
    • If you have the camera (widefield) option activated, you will see some widefield-specific tabs on the left.

    • In the "Beam Pass" tab, select "TL-BF" if you want to image with brightfield.

    • Before using brightfield, please remember to remove the protection cap.

    • If you want to use fluorescence instead, select "FLUO".

    • At the SP8 MP DIVE, only one filter cube for GFP is installed.

  3. Go "Live". The camera has a rectangular format, which is different from the standard square format in confocal.
    • Go "Live".

    • The camera has a rectangular format, which is different from the standard square format in confocal.

    • Adjust the Exposure Time. Longer exposure times will lead to better signal.

    • You can use binning (up to 5x5) in the "Image Format", which will sacrifice some resolution in order to get better signal with unchanged exposure time.

    • This is a good strategy if you have a light-sensitive sample.

    • For the fastest overview, leave the "Port Magnification" at 0.35.

    • You can now use all the tools available in the Navigator (i.e. Spiral, Polygon, etc.) in order to define your region to be imaged.

    • Press "Start" to acquire the overview

  4. You may notice some dark shadows at the edges. Make sure that in the "Illumination" tab the field aperture "IL-Fld" is at 6. If smaller, the dark shadows grow bigger. However, with a Port Magnification of 0.35, there is always a little shadow. A workaround (even though slower) is to increase the Port Magnification. As a result, the field of view (FOW) will be smaller. This will also decrease pixel size and therefore increase resolution.
    • You may notice some dark shadows at the edges.

    • Make sure that in the "Illumination" tab the field aperture "IL-Fld" is at 6. If smaller, the dark shadows grow bigger. However, with a Port Magnification of 0.35, there is always a little shadow.

    • A workaround (even though slower) is to increase the Port Magnification. As a result, the field of view (FOW) will be smaller. This will also decrease pixel size and therefore increase resolution.

    • For comparison, the confocal FOV with zoom=1 is shown.

    • Another option is to use only part of the camera chip via "ROI": the FOV gets smaller, however without a change in pixel size (indicated by the white line).

    • If you want to use the eyepieces again (e.g. for focusing), you will need to switch manually to the correct beam path on the external controller.

Finish Line

Karin Seubert

Member since: 7/14/21

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